论文标题

肿瘤诱导的血管生成的3D CA模型

3D CA model of tumor-induced angiogenesis

论文作者

Saha, Monjoy, Ray, Amit Kumar, Basu, Swapan Kumar

论文摘要

肿瘤诱导的血管生成是从附近的亲本血管中形成了新的芽菜。在计算上,可以使用细胞自动机(CA),部分微分方程等进行肿瘤诱导的血管生成。在本研究中,已经采用了一种现实的生理方法来通过使用3D CA模型来建模血管生成过程。 CA Technique使用冯·尼曼(Von-Neumann)社区,摩尔社区和玛格卢斯(Margolus)社区等各个社区。在我们的模型中,von-Neumann邻居已用于分布一些重要的化学和非化学肿瘤血管生成因子,例如血管内皮生长因子,内皮细胞,O2,细胞外基质,纤维蛋白等,以及Moore邻域用于基质金属蛋白酶的分布。体内肿瘤环境所有因素均未在细胞外基质中平均分布。这些化学因素和非化学因素的分布取决于它们的来源,性质和功能。为了保持与生物肿瘤环境的相似性,我们相应地提出了化学和非化学因素的初始分布。我们已经在MATLAB中开始使用此初始分布的模拟。豆芽的数量随机从一次运行到另一种变化。我们观察到芽并非来自每个模拟中的相同位置。发芽的VEGF和纤连蛋白浓度具有很高的灵敏度。 SVEGFR-1总是试图回归新芽。当两个或两个以上的豆芽靠近时,它们相互合并,导致吻合。足够数量的尖端细胞可能导致肿瘤发芽。

Tumor-induced angiogenesis is the formation of new sprouts from preexisting nearby parent blood vessels. Computationally, tumor-induced angiogenesis can be modeled using cellular automata (CA), partial differential equations, etc. In this present study, a realistic physiological approach has been made to model the process of angiogenesis by using 3D CA model. CA technique uses various neighborhoods like Von-Neumann neighborhood, Moore neighborhood, and Margolus neighborhood. In our model Von-Neumann neighborhood has used for distribution of some significant chemical and non-chemical tumor angiogenic factors like vascular endothelial growth factor, endothelial cells, O2, extracellular matrix, fibronectin, etc., and Moore neighborhood is used for distribution of matrix metalloproteinase. In vivo tumor environment all the factors are not distributed equally in the extracellular matrix. Distributions of those chemical and nonchemical factors depend on their source, nature and function. To keep similarity with the biological tumor environment, we have formulated initial distributions of the chemical and non-chemical factors accordingly. We have started the simulation in MATLAB with this initial distribution. Number of sprouts randomly varies from one run to another. We observed that sprouts are not originating from the same locations in each simulation. A sprout has high sensitivity of VEGF and fibronectin concentrations. sVEGFR-1 always tries to regress the sprout. When two or more sprouts come closer, they merge with each other leading to anastomosis. Sufficient number of tip cells may cause sprout towards tumor.

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