论文标题
通过生物形象分析软件宇宙的Hitchhiker指南
A Hitchhiker`s Guide through the Bio-image Analysis Software Universe
论文作者
论文摘要
没有计算方法来提取，量化和可视化生物学显微镜成像数据中获得的信息的计算方法，生活科学的现代研究是不可想象的。在过去的十年中，我们观察到为此目的，可用的软件包急剧增加。由于很难跟踪可用的图像分析平台，工具收集，组件和新兴技术的数量，因此我们提供了我们在日常例程中使用的软件的保守概述，并为新兴的新工具提供了见解。我们为选择正确的平台时要考虑哪些方面，包括图像数据类型，团队的技能，基础架构和社区的各个方面以及时间和预算的可用性。
Modern research in the life sciences is unthinkable without computational methods for extracting, quantifying and visualizing information derived from biological microscopy imaging data. In the past decade, we observed a dramatic increase in available software packages for these purposes. As it is increasingly difficult to keep track of the number of available image analysis platforms, tool collections, components and emerging technologies, we provide a conservative overview of software we use in daily routine and give insights into emerging new tools. We give guidance on which aspects to consider when choosing the right platform, including aspects such as image data type, skills of the team, infrastructure and community at the institute and availability of time and budget.
