论文标题

迈向流行病学研究的公平实践

Moving towards FAIR practices in epidemiological research

论文作者

Garcia-Closas, Montserrat, Ahearn, Thomas U., Gaudet, Mia M., Hurson, Amber N., Balasubramanian, Jeya Balaji, Choudhury, Parichoy Pal, Gerlanc, Nicole M., Patel, Bhaumik, Russ, Daniel, Abubakar, Mustapha, Freedman, Neal D., Wong, Wendy S. W., Chanock, Stephen J., de Gonzalez, Amy Berrington, Almeida, Jonas S

论文摘要

研究发现的可重复性和可复制性对于流行病学的科学完整性至关重要。此外,许多研究问题需要从多个来源组合数据才能实现足够的统计能力。但是,与机密性,成本和激励措施相关的障碍通常会限制共享资源(数据和代码)的范围和速度。遵循公平原则的流行病学实践可以通过使资源(f)使用必要的元数据来解决这些障碍,(f)可用于授权用户,以及(i)与其他数据相关的,以优化(r)适当的资源利用并对其创建者进行信用。我们提供了这些原则的概述,并描述了流行病学实施的方法。通过使用机器可读和非专有文件,可以通过将数据和代码从现场位置移动到云以及开发开源代码来实现公平程度的增加。采用这些实践将改善日常工作和协作分析,并促进遵守资助者和科学期刊的数据共享政策。实现高度公平,将需要资金,培训,组织支持,认可和共享资源的激励措施。但是,通过促进科学界的重新利用宝贵的研究资源,使研究更加可重复,有影响力和公平的好处使这些成本大大超过了这些成本。

Reproducibility and replicability of research findings are central to the scientific integrity of epidemiology. In addition, many research questions require combiningdata from multiple sources to achieve adequate statistical power. However, barriers related to confidentiality, costs, and incentives often limit the extent and speed of sharing resources, both data and code. Epidemiological practices that follow FAIR principles can address these barriers by making resources (F)indable with the necessary metadata , (A)ccessible to authorized users and (I)nteroperable with other data, to optimize the (R)e-use of resources with appropriate credit to its creators. We provide an overview of these principles and describe approaches for implementation in epidemiology. Increasing degrees of FAIRness can be achieved by moving data and code from on-site locations to the Cloud, using machine-readable and non-proprietary files, and developing open-source code. Adoption of these practices will improve daily work and collaborative analyses, and facilitate compliance with data sharing policies from funders and scientific journals. Achieving a high degree of FAIRness will require funding, training, organizational support, recognition, and incentives for sharing resources. But these costs are amply outweighed by the benefits of making research more reproducible, impactful, and equitable by facilitating the re-use of precious research resources by the scientific community.

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